Disclaimer: The author of this software accepts no responsibility for damages resulting from the use of these products and makes no warranty or representation, either express or implied, including but not limited to, any implied warranty of merchantability or fitness for a particular purpose. This software is provided "AS IS", and you, its user, assume all risks when using it.

The software linked below is freeware. Any questions and comments should be directed to me:
David Mayerich
Beckman Institute for Advanced Science and Technology
University of Illinois, Urbana-Champaign
www.davidmayerich.net

 
Out-of-Core Stack Processor
Alpha - [05-28-2010]
This software performs basic processing for extremely large 3D data sets in the form of image stacks. It is designed specifically for large data sets created using high-throughput microscopy and relies on data streaming to and from the hard drive. Software features include cropping and re-sampling. This software also includes relighting algorithms specific to Knife-Edge Scanning Microscopy (discussed in our ISBI 2007 paper).
GPUTracer
Alpha - Windows Installer
GPU-accelerated vector tracking. This software is used to quickly segment filaments in volumetric data sets using template matching based on the Sum of Absolute Differences. The method is described in our IEEE TVCG 2009 paper.